STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363249Zgc:153215. (423 aa)    
Predicted Functional Partners:
ENSSPAP00000001574
Uncharacterized protein.
    
  0.545
ENSSPAP00000003754
Uncharacterized protein.
    
  0.545
ubxn7
UBX domain protein 7.
    
  0.545
crocc
Uncharacterized protein.
    
  0.545
LOC103364512
Trinucleotide repeat containing adaptor 6C2.
    
  0.545
tnrc6a
Trinucleotide repeat containing adaptor 6A.
    
  0.545
LOC103361861
Trinucleotide repeat containing adaptor 6C1.
    
  0.545
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.545
crocc2
Ciliary rootlet coiled-coil, rootletin family member 2.
    
  0.545
sidt2
SID1 transmembrane family, member 2.
    
  0.545
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.