STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z517_05978Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (814 aa)    
Predicted Functional Partners:
Z517_12416
Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence.
    
   0.889
Z517_10419
Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.
    
 
 0.779
Z517_05970
Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.
    
 
 0.766
Z517_07874
Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.
    
   0.631
Z517_01195
Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.
    
   0.624
Z517_12388
Prohibitin.
    
   0.610
Z517_11413
Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence.
    
   0.604
Z517_03093
Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.
   
 
 0.592
Z517_11624
Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence.
    
  0.591
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
  0.584
Your Current Organism:
Fonsecaea pedrosoi
NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.