STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z517_06909Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (497 aa)    
Predicted Functional Partners:
Z517_00437
Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.
    
  0.684
Z517_00576
Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 43 family.
    
 0.636
Z517_09677
Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 28 family.
    
 0.634
Z517_00406
Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.
    
 0.560
Z517_05414
Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.
   
  0.555
Z517_10557
Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.
    
  0.533
Z517_08142
Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.
    
  0.517
Z517_12141
Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence.
    
 0.494
Z517_00203
Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.
    
 0.494
Z517_04607
Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the glycosyl hydrolase 32 family.
     
 0.490
Your Current Organism:
Fonsecaea pedrosoi
NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.