STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z520_07481Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
Z520_10808
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.991
Z520_01136
Pre-mRNA-splicing factor slt11.
   
 
 0.989
Z520_00659
Pre-mRNA-splicing factor syf1.
   
 
 0.989
Z520_09068
Pre-mRNA-splicing factor clf1.
    
 
 0.989
Z520_02041
Pre-mRNA-splicing factor isy1.
   
 
 0.989
Z520_00525
Pre-mRNA-splicing factor prp46.
    
 
 0.989
Z520_02429
Pre-mRNA-processing-splicing factor 8.
    
 
 0.988
Z520_07058
Uncharacterized protein.
    
 
 0.988
Z520_08378
WD_REPEATS_REGION domain-containing protein.
    
 0.986
Z520_05813
RRM domain-containing protein.
    
 0.985
Your Current Organism:
Fonsecaea multimorphosa
NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.