STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000520995_02835Unannotated protein. (112 aa)    
Predicted Functional Partners:
GCA_000520995_02834
Unannotated protein.
 
   
 0.886
GCA_000520995_00550
Unannotated protein.
  
     0.762
GCA_000520995_01785
Unannotated protein.
  
     0.762
GCA_000520995_01059
Unannotated protein.
  
     0.735
GCA_000520995_02833
Unannotated protein.
 
     0.698
GCA_000520995_01510
Unannotated protein.
  
     0.652
GCA_000520995_03916
Unannotated protein.
  
   
 0.629
GCA_000520995_03445
Unannotated protein.
  
     0.625
GCA_000520995_02836
Unannotated protein.
       0.621
GCA_000520995_03291
Unannotated protein.
  
     0.600
Your Current Organism:
Aquimarina macrocephali
NCBI taxonomy Id: 1443665
Other names: A. macrocephali JAMB N27, Aquimarina macrocephali JAMB N27, Aquimarina macrocephali JCM 15542, Aquimarina macrocephali NCIMB 14508, Aquimarina sp. JAMB N27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.