STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000520995_05040Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_000520995_02929
Unannotated protein.
  
 
  0.827
GCA_000520995_00603
Unannotated protein.
  
 
  0.821
GCA_000520995_05039
Unannotated protein.
  
 
  0.819
GCA_000520995_01929
Unannotated protein.
  
 
  0.780
GCA_000520995_01387
Unannotated protein.
 
 
  0.744
GCA_000520995_05125
Unannotated protein.
  
 
 
0.740
GCA_000520995_04718
Unannotated protein.
  
 
  0.723
GCA_000520995_00893
Unannotated protein.
  
 
 
0.720
GCA_000520995_05124
Unannotated protein.
  
     0.717
GCA_000520995_01102
Unannotated protein.
  
 
  0.711
Your Current Organism:
Aquimarina macrocephali
NCBI taxonomy Id: 1443665
Other names: A. macrocephali JAMB N27, Aquimarina macrocephali JAMB N27, Aquimarina macrocephali JCM 15542, Aquimarina macrocephali NCIMB 14508, Aquimarina sp. JAMB N27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.