STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH298_23335Unannotated protein. (122 aa)    
Predicted Functional Partners:
CH298_19095
Unannotated protein.
  
     0.772
CH298_23340
Unannotated protein; Belongs to the methyltransferase superfamily.
       0.770
CH298_23330
Unannotated protein.
 
     0.768
CH298_20220
Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.764
CH298_19260
Unannotated protein.
  
     0.761
CH298_16510
Unannotated protein.
  
     0.757
GCA_000761075_05600
Unannotated protein.
  
     0.757
CH298_18680
Unannotated protein.
  
     0.756
CH298_24190
Unannotated protein.
  
     0.744
GCA_000761075_00256
Unannotated protein.
  
     0.737
Your Current Organism:
Rhodococcus fascians LMG3625
NCBI taxonomy Id: 1443905
Other names: R. fascians LMG 3625, Rhodococcus fascians LMG 3625
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.