STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH298_20495Unannotated protein. (315 aa)    
Predicted Functional Partners:
CH298_06745
Unannotated protein.
  
 0.999
GCA_000761075_00630
Unannotated protein.
 
0.999
CH298_07590
Unannotated protein.
 0.999
GCA_000761075_04420
Unannotated protein.
  
 0.999
CH298_13570
Unannotated protein.
 0.998
CH298_01410
Unannotated protein.
 0.995
CH298_01745
Unannotated protein.
 
0.995
GCA_000761075_02964
Unannotated protein.
 
 0.995
GCA_000761075_04686
Unannotated protein.
 
0.995
GCA_000761075_05765
Unannotated protein.
 
 0.995
Your Current Organism:
Rhodococcus fascians LMG3625
NCBI taxonomy Id: 1443905
Other names: R. fascians LMG 3625, Rhodococcus fascians LMG 3625
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.