STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX29762.1DNA metabolism protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
OBX29763.1
Putative DNA modification/repair radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.968
OBX29854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.756
OBX29764.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.751
OBX28020.1
Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
    0.558
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.464
OBX30059.1
Recombinase RecB; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.444
nnrD
Bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
 
    0.421
Your Current Organism:
Acinetobacter gandensis
NCBI taxonomy Id: 1443941
Other names: A. gandensis, ANC 4275, Acinetobacter gandensis Smet et al. 2014, Acinetobacter sp. 119/4C, Acinetobacter sp. 177/1C, Acinetobacter sp. ANC 4275, Acinetobacter sp. ANC 4319, Acinetobacter sp. ANC 4320, Acinetobacter sp. ANC 4864, Acinetobacter sp. ANC 4895, Acinetobacter sp. ANC 4896, Acinetobacter sp. UG60467, Acinetobacter sp. UG60716, Acinetobacter sp. UG60730, CCUG 68482, DSM 28097, LMG 27960, LMG:27960, strain UG 60467
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