STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ79769.1Magnesium chelatase ATPase subunit D. (330 aa)    
Predicted Functional Partners:
CDZ79770.1
Putative conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.965
CDZ79771.1
Hypothetical protein.
  
    0.784
CDZ80751.1
VWFA-related Acidobacterial domain protein.
 
 
 0.776
CDZ80752.1
Von Willebrand factor type A domain protein.
 
 
 0.737
CDZ79772.1
Hypothetical protein.
       0.523
phoR
Alkaline phosphatase synthesis sensor protein PhoR.
       0.491
mutL
DNA mismatch repair protein MutL.
  
    0.412
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.