STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ79953.1Type I secretion outer membrane protein, TolC family. (468 aa)    
Predicted Functional Partners:
macA_1
Macrolide-specific efflux protein MacA precursor.
 
  0.983
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
  0.955
macB_2
Macrolide export ATP-binding/permease protein MacB.
   
  0.928
mdtB
Multidrug transporter MdtB.
  
  0.863
mdtA_1
Multidrug transporter MdtA.
   
  0.862
czcB_1
Cation efflux system protein CzcB.
  
  0.798
macA_2
Macrolide-specific efflux protein MacA precursor.
   
  0.787
mdtN
Multidrug resistance protein MdtN.
   
  0.787
CDZ81500.1
Putative efflux pump membrane fusion protein.
   
  0.787
czcB_2
Cation efflux system protein CzcB.
  
  0.786
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.