STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcC_2Putative zinc transport system ATP-binding protein AdcC. (254 aa)    
Predicted Functional Partners:
mntB_1
Manganese transport system membrane protein MntB.
 0.999
mntB_2
Manganese transport system membrane protein MntB.
 
 0.999
troA
Tromp-1.
 
 
 0.998
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 0.985
CDZ79974.1
Putative periplasmic iron-binding protein precursor.
 
 
 0.936
CDZ80024.1
Hypothetical protein.
       0.803
minD
Cell division inhibitor MinD.
       0.765
oppD_1
Stage 0 sporulation protein KD.
 
   
 
0.761
ybhS
Inner membrane transport permease YbhS.
   
  0.708
appA
Oligopeptide-binding protein AppA precursor.
     
 0.702
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.