STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhdN_1General stress protein 69. (348 aa)    
Predicted Functional Partners:
aqpZ2
Aquaporin Z 2.
   
 
 0.627
yhdN_2
General stress protein 69.
  
     0.604
CDZ81340.1
Peptidyl-prolyl cis-trans isomerase cyp18.
    
   0.520
aas
Bifunctional protein aas.
  
 0.511
dnaJ
Heat shock protein J.
    
   0.503
metQ
Methionine-binding lipoprotein MetQ precursor.
  
    0.440
metN
Methionine import ATP-binding protein MetN.
       0.434
metI
D-methionine transport system permease protein MetI.
       0.434
ndk_1
Nucleoside diphosphate kinase.
   
   0.419
ndk_2
Nucleoside diphosphate kinase.
   
   0.419
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.