STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ80257.1Serine/threonine protein kinase. (335 aa)    
Predicted Functional Partners:
CDZ80255.1
Hypothetical protein.
 
     0.887
CDZ80256.1
Hypothetical protein.
 
     0.838
aacA4
Aminoglycoside N(6')-acetyltransferase type 1.
  
     0.774
CDZ81394.1
Acetyltransferase (GNAT) family protein.
  
     0.774
CDZ81883.1
Acetyltransferase (GNAT) family protein.
  
     0.774
CDZ81907.1
Acetyltransferase (GNAT) family protein.
  
     0.773
CDZ81261.1
Fructosamine-3-kinase.
  
     0.764
CDZ80235.1
Putative acetyltransferase.
  
     0.758
tyrP_4
Tyrosine permease.
  
     0.704
CDZ80244.1
Nucleoside triphosphate pyrophosphohydrolase.
  
     0.581
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.