STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ80438.1Protein kinase domain protein. (356 aa)    
Predicted Functional Partners:
CDZ80439.1
Hypothetical protein.
   
   0.869
CDZ80513.1
Protein phosphatase 2C.
  
  0.833
CDZ80437.1
Serine/threonine-protein kinase 1.
      
0.773
CDZ81677.1
Ankyrin repeat protein.
 
    0.755
CDZ80962.1
Hypothetical protein.
  
     0.750
CDZ81497.1
Protein kinase domain protein.
  
     0.749
CDZ81418.1
Ankyrin repeat protein.
  
    0.747
CDZ81017.1
HRD ubiquitin ligase complex, ER membrane component.
  
     0.740
CDZ81196.1
Chromosome segregation protein SMC.
  
     0.739
CDZ79604.1
MYND finger.
  
     0.705
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.