STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplV50S ribosomal protein L22. (111 aa)    
Predicted Functional Partners:
rplJ
50S ribosomal protein L10.
  
 0.999
rplC
50S ribosomal protein L3.
 
 0.999
rplW
50S ribosomal protein L23.
  
 0.999
rplB
50S ribosomal protein L2.
 
 0.999
rpsS
30S ribosomal protein S19.
 
 0.999
rpsC
Hypothetical protein; BS2.
 
 0.999
rplP
50S ribosomal protein L16.
  
 0.999
CDZ80470.1
50S ribosomal protein L29.
  
 0.999
rpsQ
30S ribosomal protein S17.
 
 
 0.999
rplN
50S ribosomal protein L14.
  
 0.999
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.