STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltACitrate synthase. (387 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase.
  
 0.997
citB
Aconitate hydratase.
 
 0.989
sucC
Succinyl-CoA ligase [ADP-forming] subunit beta.
  
 0.986
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.982
CDZ79947.1
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 
 0.977
putA
Bifunctional protein PutA.
  
 0.962
sucD_1
Succinyl-CoA ligase [ADP-forming] subunit alpha.
  
 0.958
dmdA
2,3-dimethylmalate dehydratase large subunit.
 
 0.950
fumC
Fumarate hydratase class II.
   
 0.949
gltD
Glutamate synthase [NADPH] small chain.
  
 0.948
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.