STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDZ80747.1DNA protecting protein DprA. (340 aa)    
Predicted Functional Partners:
topA
DNA topoisomerase 1.
   
 0.909
comM
Competence protein ComM.
 
 0.908
CDZ80054.1
DNA utilization protein GntX.
 
 
 0.873
ribC
Riboflavin synthase.
       0.714
CDZ81138.1
ComEC/Rec2-related protein.
 
  
 0.709
recA
Recombinase A.
   
 
 0.617
epsE_1
Type II traffic warden ATPase.
  
  
 0.563
CDZ80744.1
Putative choloylglycine hydrolase.
       0.474
CDZ80748.1
Hypothetical protein.
       0.445
CDZ80524.1
DNA repair protein RadC.
   
  
 0.413
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.