STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accCBiotin carboxylase. (454 aa)    
Predicted Functional Partners:
accB
Biotin carboxyl carrier protein of acetyl-CoA carboxylase.
 
 0.999
CDZ79947.1
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 0.998
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
 0.997
accA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha.
 
 0.976
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.956
aas
Bifunctional protein aas.
  
 
 0.953
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A.
   
 0.951
fabH
3-oxoacyl-[acyl-carrier-protein] synthase 3.
  
 
 0.925
pyk
Pyruvate kinase.
   
 
 0.921
gltD
Glutamate synthase [NADPH] small chain.
  
 
 0.908
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.