STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrP_4Tyrosine permease. (399 aa)    
Predicted Functional Partners:
trpR
Trp operon repressor.
  
   
 0.729
aacA4
Aminoglycoside N(6')-acetyltransferase type 1.
  
     0.705
CDZ80257.1
Serine/threonine protein kinase.
  
     0.704
CDZ81907.1
Acetyltransferase (GNAT) family protein.
  
     0.671
CDZ81394.1
Acetyltransferase (GNAT) family protein.
  
     0.668
CDZ81883.1
Acetyltransferase (GNAT) family protein.
  
     0.663
CDZ81261.1
Fructosamine-3-kinase.
  
     0.646
CDZ80235.1
Putative acetyltransferase.
  
     0.635
uhpC
Regulatory protein UhpC.
  
     0.572
CDZ81439.1
Hypothetical protein.
  
     0.571
Your Current Organism:
Rubidus massiliensis
NCBI taxonomy Id: 1444712
Other names: C. Rubidus massiliensis, Candidatus Rubidus massiliensis, Chlamydia sp. Rubis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.