STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtx-1Metaxin-1-like protein. (310 aa)    
Predicted Functional Partners:
gop-3
SAM50-like protein gop-3.
   
 0.996
C18E9.6
Mitochondrial import receptor subunit TOM40-like protein.
   
 0.987
MTX2
Metaxin-2.
  
 
0.916
tomm20b
Mitochondrial import receptor subunit TOM20-like protein B.
    
 0.808
Immt
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 0.755
porin
Voltage-dependent anion-selective channel.
    
 0.679
SLC39A1
Zinc transporter ZIP1.
    
 
 0.674
SLC39A3
Zinc transporter ZIP3.
    
 
 0.674
MINOS1
MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 0.631
timm8a
Mitochondrial import inner membrane translocase subunit Tim8 A; Belongs to the small Tim family.
    
 
 0.592
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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