STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNPLA4Patatin-like phospholipase domain-containing protein 4. (272 aa)    
Predicted Functional Partners:
HSD17B11
Estradiol 17-beta-dehydrogenase 11.
     
 0.897
T05_11296
Alcohol dehydrogenase class-3.
     
 0.895
ABHD4
Abhydrolase domain-containing protein 4.
    
 0.869
CYP4V2
Cytochrome P450 4V2; Belongs to the cytochrome P450 family.
   
 
 0.803
HSD17B6
17-beta-hydroxysteroid dehydrogenase type 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.803
T05_10809
Putative oxidoreductase-like protein.
   
 
 0.801
SOAT1
O-acyltransferase.
     
 0.708
LPIN2
Phosphatidate phosphatase LPIN2.
     
 0.708
RDH12
Retinol dehydrogenase 12.
     
 0.700
RDH13
Retinol dehydrogenase 13.
     
 0.700
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.