STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phrDeoxyribodipyrimidine photo-lyase. (514 aa)    
Predicted Functional Partners:
per
Period circadian-like protein 3.
   
 0.993
TIMELESS
Protein timeless-like protein.
    
 0.912
EIF2AK3
Eukaryotic translation initiation factor 2-alpha kinase 3.
    
 0.874
FBXL14
F-box/LRR-repeat protein 14.
    
 0.799
T05_9192
F-box domain-containing protein.
    
 0.799
C02F5.7
Putative F-box/LRR-repeat-like protein.
    
 0.799
Arntl
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.723
NPAS2
Neuronal PAS domain-containing protein 2.
    
 0.723
aha-1
Aryl hydrocarbon receptor nuclear translocator-like protein.
    
 0.723
JTB
Nuclear receptor coactivator 2.
    
 0.723
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.