Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Act5C | HSPB1 | A0A0V0UHV8 | A0A0V0U941 | Actin-5C. | Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. | 0.518 |
Act5C | ifa-1 | A0A0V0UHV8 | A0A0V0TH75 | Actin-5C. | Intermediate filament protein ifa-1; Belongs to the intermediate filament family. | 0.770 |
Act5C | unc-15 | A0A0V0UHV8 | A0A0V0TIN3 | Actin-5C. | Paramyosin. | 0.859 |
Act5C | unc-54 | A0A0V0UHV8 | A0A0V0TVZ1 | Actin-5C. | Myosin-4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.859 |
Act5C | unc-54-2 | A0A0V0UHV8 | A0A0V0U236 | Actin-5C. | Myosin-4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.834 |
HSPB1 | Act5C | A0A0V0U941 | A0A0V0UHV8 | Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. | Actin-5C. | 0.518 |
HSPB1 | ifa-1 | A0A0V0U941 | A0A0V0TH75 | Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. | Intermediate filament protein ifa-1; Belongs to the intermediate filament family. | 0.628 |
HSPB1 | unc-15 | A0A0V0U941 | A0A0V0TIN3 | Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. | Paramyosin. | 0.611 |
LEMD3 | T05_8561 | A0A0V0U3D9 | A0A0V0U1U5 | Inner nuclear membrane protein Man1. | LEM domain-containing protein. | 0.798 |
LEMD3 | baf-1 | A0A0V0U3D9 | A0A0V0TT52 | Inner nuclear membrane protein Man1. | Barrier-to-autointegration factor 1. | 0.808 |
LEMD3 | baf-1-2 | A0A0V0U3D9 | A0A0V0U649 | Inner nuclear membrane protein Man1. | Barrier-to-autointegration factor 1. | 0.808 |
LEMD3 | ifa-1 | A0A0V0U3D9 | A0A0V0TH75 | Inner nuclear membrane protein Man1. | Intermediate filament protein ifa-1; Belongs to the intermediate filament family. | 0.742 |
RBM39 | T05_8561 | A0A0V0TZR2 | A0A0V0U1U5 | RNA-binding protein 39. | LEM domain-containing protein. | 0.699 |
RBM39 | baf-1 | A0A0V0TZR2 | A0A0V0TT52 | RNA-binding protein 39. | Barrier-to-autointegration factor 1. | 0.754 |
RBM39 | baf-1-2 | A0A0V0TZR2 | A0A0V0U649 | RNA-binding protein 39. | Barrier-to-autointegration factor 1. | 0.754 |
RBM39 | ifa-1 | A0A0V0TZR2 | A0A0V0TH75 | RNA-binding protein 39. | Intermediate filament protein ifa-1; Belongs to the intermediate filament family. | 0.679 |
T05_8561 | LEMD3 | A0A0V0U1U5 | A0A0V0U3D9 | LEM domain-containing protein. | Inner nuclear membrane protein Man1. | 0.798 |
T05_8561 | RBM39 | A0A0V0U1U5 | A0A0V0TZR2 | LEM domain-containing protein. | RNA-binding protein 39. | 0.699 |
T05_8561 | baf-1 | A0A0V0U1U5 | A0A0V0TT52 | LEM domain-containing protein. | Barrier-to-autointegration factor 1. | 0.934 |
T05_8561 | baf-1-2 | A0A0V0U1U5 | A0A0V0U649 | LEM domain-containing protein. | Barrier-to-autointegration factor 1. | 0.934 |
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