STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PiglN-acetylglucosaminyl-phosphatidylinositol de-N-acetylase. (280 aa)    
Predicted Functional Partners:
Piga
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
  
 
 0.911
Pigp
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P.
     
 0.904
Pigc
Phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
     
 0.904
CARS
Cysteine--tRNA ligase, cytoplasmic.
  
 
 0.886
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
    
 0.852
gwt1
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
     
 0.827
pat-2
Integrin alpha-8; Belongs to the integrin alpha chain family.
     
 0.797
Pigq
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q.
     
 0.789
ttx-7
Inositol-1-monophosphatase.
    
 0.742
GNPDA1
Glucosamine-6-phosphate isomerase 1.
    
 0.731
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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