STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPT7Septin-7; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (552 aa)    
Predicted Functional Partners:
sept8-b
Septin-8-B; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
  
0.990
birc5.2
Baculoviral IAP repeat-containing protein 5.2.
    
 0.877
slgA
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.791
scra
Actin-binding protein anillin.
   
 
 0.710
Plk1
Serine/threonine-protein kinase PLK.
   
 0.683
Actr1a
Alpha-centractin; Belongs to the actin family.
    
 0.667
TONSL
Tonsoku-like protein.
    
 0.663
SAK
Serine/threonine-protein kinase PLK4.
    
 0.654
Mapkapk3
MAP kinase-activated protein kinase 3.
   
 
  0.632
Brsk2
Serine/threonine-protein kinase BRSK2.
    
 
 0.597
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.