STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCORBCL-6 corepressor. (710 aa)    
Predicted Functional Partners:
MLLT1
Protein ENL.
    
 
 0.786
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.752
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.734
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.734
Ttc30b
Tetratricopeptide repeat protein 30B.
    
 0.723
Ift52
Intraflagellar transport protein 52-like protein.
    
 0.716
Ift57
Intraflagellar transport protein 57-like protein.
    
 0.688
Ift80
Intraflagellar transport protein 80-like protein.
   
 0.679
ift172
Intraflagellar transport protein-like protein.
    
 0.677
Gak
Cyclin-G-associated kinase.
   
 0.656
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.