Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atx2 | DDX1 | A0A0V0TQH7 | A0A0V0TFK3 | Ataxin-2-like protein. | ATP-dependent RNA helicase DDX1. | 0.408 |
Atx2 | Fam98a | A0A0V0TQH7 | A0A0V0TQY1 | Ataxin-2-like protein. | Protein FAM98A. | 0.463 |
Atx2 | LSM12 | A0A0V0TQH7 | A0A0V0TFU3 | Ataxin-2-like protein. | Protein LSM12-like protein. | 0.999 |
DDX1 | Atx2 | A0A0V0TFK3 | A0A0V0TQH7 | ATP-dependent RNA helicase DDX1. | Ataxin-2-like protein. | 0.408 |
DDX1 | E01A2.2 | A0A0V0TFK3 | A0A0V0TCX0 | ATP-dependent RNA helicase DDX1. | Serrate RNA effector molecule-like protein. | 0.531 |
DDX1 | EFTUD1 | A0A0V0TFK3 | A0A0V0UID1 | ATP-dependent RNA helicase DDX1. | Elongation factor Tu GTP-binding domain-containing protein 1. | 0.623 |
DDX1 | Fam98a | A0A0V0TFK3 | A0A0V0TQY1 | ATP-dependent RNA helicase DDX1. | Protein FAM98A. | 0.933 |
DDX1 | T05_10769 | A0A0V0TFK3 | A0A0V0TV15 | ATP-dependent RNA helicase DDX1. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.950 |
E01A2.2 | DDX1 | A0A0V0TCX0 | A0A0V0TFK3 | Serrate RNA effector molecule-like protein. | ATP-dependent RNA helicase DDX1. | 0.531 |
E01A2.2 | Fam98a | A0A0V0TCX0 | A0A0V0TQY1 | Serrate RNA effector molecule-like protein. | Protein FAM98A. | 0.454 |
E01A2.2 | Hypk | A0A0V0TCX0 | A0A0V0UDR2 | Serrate RNA effector molecule-like protein. | Huntingtin-interacting protein K. | 0.550 |
EFTUD1 | DDX1 | A0A0V0UID1 | A0A0V0TFK3 | Elongation factor Tu GTP-binding domain-containing protein 1. | ATP-dependent RNA helicase DDX1. | 0.623 |
EFTUD1 | Fam98a | A0A0V0UID1 | A0A0V0TQY1 | Elongation factor Tu GTP-binding domain-containing protein 1. | Protein FAM98A. | 0.450 |
Fam98a | Atx2 | A0A0V0TQY1 | A0A0V0TQH7 | Protein FAM98A. | Ataxin-2-like protein. | 0.463 |
Fam98a | DDX1 | A0A0V0TQY1 | A0A0V0TFK3 | Protein FAM98A. | ATP-dependent RNA helicase DDX1. | 0.933 |
Fam98a | E01A2.2 | A0A0V0TQY1 | A0A0V0TCX0 | Protein FAM98A. | Serrate RNA effector molecule-like protein. | 0.454 |
Fam98a | EFTUD1 | A0A0V0TQY1 | A0A0V0UID1 | Protein FAM98A. | Elongation factor Tu GTP-binding domain-containing protein 1. | 0.450 |
Fam98a | Hypk | A0A0V0TQY1 | A0A0V0UDR2 | Protein FAM98A. | Huntingtin-interacting protein K. | 0.457 |
Fam98a | LSM12 | A0A0V0TQY1 | A0A0V0TFU3 | Protein FAM98A. | Protein LSM12-like protein. | 0.449 |
Fam98a | T05_10769 | A0A0V0TQY1 | A0A0V0TV15 | Protein FAM98A. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.444 |
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