STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPC22Signal peptidase complex subunit 3. (182 aa)    
Predicted Functional Partners:
Taf6
Putative signal peptidase complex subunit 2.
   
 0.995
SPCS1
Signal peptidase complex subunit 1.
   
 0.994
immp1l
Mitochondrial inner membrane protease subunit 1.
   
 0.984
CYN
Cyanate hydratase.
   
 0.951
Sec63
Translocation protein SEC63-like protein.
    
 
 0.696
RPN2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.618
ALG2
Alpha-1,3/1,6-mannosyltransferase ALG2.
   
 
  0.565
ALG2-2
Alpha-1,3/1,6-mannosyltransferase ALG2.
   
 
  0.565
ALG2-3
Alpha-1,3/1,6-mannosyltransferase ALG2.
   
 
  0.565
SRP19
Signal recognition particle 19 kDa protein.
   
  
 0.498
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.