Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc73 | DDB1 | A0A0V0UAG3 | A0A0V0TB48 | Parafibromin. | DNA damage-binding protein 1. | 0.541 |
Cdc73 | LEO1 | A0A0V0UAG3 | A0A0V0TTG9 | Parafibromin. | RNA polymerase-associated protein LEO1. | 0.999 |
Cdc73 | RTF1 | A0A0V0UAG3 | A0A0V0TTU9 | Parafibromin. | RNA polymerase-associated protein RTF1-like protein. | 0.998 |
Cdc73 | Ssrp1 | A0A0V0UAG3 | A0A0V0TSY6 | Parafibromin. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.996 |
Cdc73 | Supt16h | A0A0V0UAG3 | A0A0V0U1Y2 | Parafibromin. | FACT complex subunit SPT16. | 0.998 |
Cdc73 | Supt5h | A0A0V0UAG3 | A0A0V0U830 | Parafibromin. | Transcription elongation factor SPT5. | 0.982 |
Cdc73 | T05_12424 | A0A0V0UAG3 | A0A0V0UI29 | Parafibromin. | Uncharacterized protein. | 0.966 |
Cdc73 | TCEA2 | A0A0V0UAG3 | A0A0V0UB21 | Parafibromin. | Transcription elongation factor A protein 2. | 0.868 |
Cdc73 | ctr9 | A0A0V0UAG3 | A0A0V0TD57 | Parafibromin. | RNA polymerase-associated protein CTR9-like protein. | 0.999 |
Cdc73 | wdr61 | A0A0V0UAG3 | A0A0V0U8R0 | Parafibromin. | WD repeat-containing protein 61. | 0.999 |
DDB1 | Cdc73 | A0A0V0TB48 | A0A0V0UAG3 | DNA damage-binding protein 1. | Parafibromin. | 0.541 |
DDB1 | LEO1 | A0A0V0TB48 | A0A0V0TTG9 | DNA damage-binding protein 1. | RNA polymerase-associated protein LEO1. | 0.998 |
DDB1 | Supt5h | A0A0V0TB48 | A0A0V0U830 | DNA damage-binding protein 1. | Transcription elongation factor SPT5. | 0.464 |
DDB1 | T05_12424 | A0A0V0TB48 | A0A0V0UI29 | DNA damage-binding protein 1. | Uncharacterized protein. | 0.579 |
DDB1 | TCEA2 | A0A0V0TB48 | A0A0V0UB21 | DNA damage-binding protein 1. | Transcription elongation factor A protein 2. | 0.783 |
DDB1 | ctr9 | A0A0V0TB48 | A0A0V0TD57 | DNA damage-binding protein 1. | RNA polymerase-associated protein CTR9-like protein. | 0.651 |
DDB1 | wdr61 | A0A0V0TB48 | A0A0V0U8R0 | DNA damage-binding protein 1. | WD repeat-containing protein 61. | 0.836 |
LEO1 | Cdc73 | A0A0V0TTG9 | A0A0V0UAG3 | RNA polymerase-associated protein LEO1. | Parafibromin. | 0.999 |
LEO1 | DDB1 | A0A0V0TTG9 | A0A0V0TB48 | RNA polymerase-associated protein LEO1. | DNA damage-binding protein 1. | 0.998 |
LEO1 | RTF1 | A0A0V0TTG9 | A0A0V0TTU9 | RNA polymerase-associated protein LEO1. | RNA polymerase-associated protein RTF1-like protein. | 0.999 |
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