STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc12a8Solute carrier family 12 member 8. (595 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.845
Amy2
Pancreatic alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
   
 0.597
SLC3A2
4F2 cell-surface antigen heavy chain.
   
 0.597
Alkbh2
Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2.
   
 0.597
amy
Alpha-amylase.
   
 0.597
Mal-B1
Maltase 1.
   
 0.597
NMNAT1
Nicotinamide mononucleotide adenylyltransferase 1.
    
 0.503
Sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.455
EGF1-2
Fibropellin-1.
    
 0.432
FGFR3
Fibroblast growth factor receptor 3.
    
 0.427
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.