STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (532 aa)    
Predicted Functional Partners:
CDC45
Cell division control protein 45-like protein.
   
 0.997
MCM4
DNA helicase; Belongs to the MCM family.
   
 0.997
T05_14402
Uncharacterized protein.
    
 0.997
mcm2
DNA helicase; Belongs to the MCM family.
   
 0.996
mcm5-a
DNA helicase; Belongs to the MCM family.
   
 0.995
mmcm3
DNA helicase; Belongs to the MCM family.
   
 0.995
zmcm6-b
DNA helicase; Belongs to the MCM family.
   
 0.995
POLE-2
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.994
GINS1
DNA replication complex GINS protein PSF1.
   
 
 0.989
Gins2
DNA replication complex GINS protein PSF2.
   
 
 0.984
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.