STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACACAcetyl-CoA carboxylase. (2397 aa)    
Predicted Functional Partners:
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.962
Mcat
Malonyl-CoA-acyl carrier protein transacylase, mitochondrial.
  
 
 0.945
Fasn
Fatty acid synthase.
  
 
 0.944
PCCB
Propionyl-CoA carboxylase beta chain, mitochondrial.
   
0.942
aak-2
Non-specific serine/threonine protein kinase.
    
 0.937
ACLY
ATP-citrate synthase.
  
 
 0.933
AcCoAS
Acetyl-coenzyme A synthetase.
  
 0.931
bca-1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.922
pyc-1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
0.919
Cbs
Cystathionine beta-synthase.
  
 0.909
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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