NETO2 protein (Trichinella murrelli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NETO2

Neuropilin and tolloid-like protein 2. (721 aa)

Predicted Functional Partners:

Cdcp2

0.517

sol-1

0.475

Kars

0.454

cni

0.454

GRIK2

0.420

T05_8478

0.402

T05_16180

0.402

KBP

0.402

T05_13983

0.402

T05_6003

0.402

Your Current Organism:

Trichinella murrelli

NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cdcp2	NETO2	A0A0V0U4L4	A0A0V0TYN8	CUB domain-containing protein 2.	Neuropilin and tolloid-like protein 2.	0.517
Cdcp2	sol-1	A0A0V0U4L4	A0A0V0UBD5	CUB domain-containing protein 2.	Suppressor of lurcher protein 1.	0.545
GRIK2	NETO2	A0A0V0TER9	A0A0V0TYN8	Glutamate receptor ionotropic, kainate 2.	Neuropilin and tolloid-like protein 2.	0.420
KBP	NETO2	A0A0V0TK47	A0A0V0TYN8	Putative glutamate receptor.	Neuropilin and tolloid-like protein 2.	0.402
Kars	NETO2	A0A0V0TKA7	A0A0V0TYN8	Lysine--tRNA ligase.	Neuropilin and tolloid-like protein 2.	0.454
NETO2	Cdcp2	A0A0V0TYN8	A0A0V0U4L4	Neuropilin and tolloid-like protein 2.	CUB domain-containing protein 2.	0.517
NETO2	GRIK2	A0A0V0TYN8	A0A0V0TER9	Neuropilin and tolloid-like protein 2.	Glutamate receptor ionotropic, kainate 2.	0.420
NETO2	KBP	A0A0V0TYN8	A0A0V0TK47	Neuropilin and tolloid-like protein 2.	Putative glutamate receptor.	0.402
NETO2	Kars	A0A0V0TYN8	A0A0V0TKA7	Neuropilin and tolloid-like protein 2.	Lysine--tRNA ligase.	0.454
NETO2	T05_13983	A0A0V0TYN8	A0A0V0TKI6	Neuropilin and tolloid-like protein 2.	Uncharacterized protein.	0.402
NETO2	T05_16180	A0A0V0TYN8	A0A0V0TJE8	Neuropilin and tolloid-like protein 2.	Uncharacterized protein.	0.402
NETO2	T05_6003	A0A0V0TYN8	A0A0V0TKN0	Neuropilin and tolloid-like protein 2.	Uncharacterized protein.	0.402
NETO2	T05_8478	A0A0V0TYN8	A0A0V0TDK0	Neuropilin and tolloid-like protein 2.	Uncharacterized protein.	0.402
NETO2	cni	A0A0V0TYN8	A0A0V0TUJ1	Neuropilin and tolloid-like protein 2.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.454
NETO2	sol-1	A0A0V0TYN8	A0A0V0UBD5	Neuropilin and tolloid-like protein 2.	Suppressor of lurcher protein 1.	0.475
T05_13983	NETO2	A0A0V0TKI6	A0A0V0TYN8	Uncharacterized protein.	Neuropilin and tolloid-like protein 2.	0.402
T05_16180	NETO2	A0A0V0TJE8	A0A0V0TYN8	Uncharacterized protein.	Neuropilin and tolloid-like protein 2.	0.402
T05_6003	NETO2	A0A0V0TKN0	A0A0V0TYN8	Uncharacterized protein.	Neuropilin and tolloid-like protein 2.	0.402
T05_8478	NETO2	A0A0V0TDK0	A0A0V0TYN8	Uncharacterized protein.	Neuropilin and tolloid-like protein 2.	0.402
cni	NETO2	A0A0V0TUJ1	A0A0V0TYN8	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Neuropilin and tolloid-like protein 2.	0.454