Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
rom-1Rhomboid-related protein 1. (446 aa)    
Predicted Functional Partners:
opa1
Mitochondrial dynamin-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
 
 0.615
Adam10
Disintegrin and metalloproteinase domain-containing protein 10.
    
 0.605
Egfr
Receptor protein-tyrosine kinase.
    
 
 0.604
Tace
ADAM 17-like protease.
    
 0.591
psen2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.523
S
Protein Star.
    
 
 0.510
Mthfs
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
  
 0.506
Rho1
Ras-like GTP-binding protein Rho1.
    
 
 0.498
Mmadhc
Methylmalonic aciduria and homocystinuria type D-like protein, mitochondrial.
 
 
    0.467
ftt-2
14-3-3-like protein 2; Belongs to the 14-3-3 family.
      
 0.464
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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