Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B52 | HNRNPF | A0A0V0TN22 | A0A0V0UBB8 | Serine-arginine protein 55. | Heterogeneous nuclear ribonucleoprotein F. | 0.695 |
B52 | Hnrnpl | A0A0V0TN22 | A0A0V0U8T3 | Serine-arginine protein 55. | Heterogeneous nuclear ribonucleoprotein L. | 0.634 |
B52 | NCBP2 | A0A0V0TN22 | A0A0V0U7R7 | Serine-arginine protein 55. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.887 |
B52 | Pcbp3 | A0A0V0TN22 | A0A0V0UHZ5 | Serine-arginine protein 55. | Poly(RC)-binding protein 3. | 0.725 |
B52 | RSPRY1 | A0A0V0TN22 | A0A0V0TZC2 | Serine-arginine protein 55. | RING finger and SPRY domain-containing protein 1. | 0.655 |
B52 | SRSF1 | A0A0V0TN22 | A0A0V0U6W6 | Serine-arginine protein 55. | Serine/arginine-rich splicing factor 1. | 0.818 |
B52 | T05_15037 | A0A0V0TN22 | A0A0V0U5K5 | Serine-arginine protein 55. | Uncharacterized protein. | 0.648 |
B52 | T05_2796 | A0A0V0TN22 | A0A0V0UD98 | Serine-arginine protein 55. | Y-box factor-like protein. | 0.639 |
HNRNPF | B52 | A0A0V0UBB8 | A0A0V0TN22 | Heterogeneous nuclear ribonucleoprotein F. | Serine-arginine protein 55. | 0.695 |
HNRNPF | Hnrnpl | A0A0V0UBB8 | A0A0V0U8T3 | Heterogeneous nuclear ribonucleoprotein F. | Heterogeneous nuclear ribonucleoprotein L. | 0.771 |
HNRNPF | Myef2 | A0A0V0UBB8 | A0A0V0TY60 | Heterogeneous nuclear ribonucleoprotein F. | Myelin expression factor 2. | 0.813 |
HNRNPF | NCBP2 | A0A0V0UBB8 | A0A0V0U7R7 | Heterogeneous nuclear ribonucleoprotein F. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.771 |
HNRNPF | Pcbp3 | A0A0V0UBB8 | A0A0V0UHZ5 | Heterogeneous nuclear ribonucleoprotein F. | Poly(RC)-binding protein 3. | 0.613 |
HNRNPF | RSPRY1 | A0A0V0UBB8 | A0A0V0TZC2 | Heterogeneous nuclear ribonucleoprotein F. | RING finger and SPRY domain-containing protein 1. | 0.710 |
HNRNPF | SRSF1 | A0A0V0UBB8 | A0A0V0U6W6 | Heterogeneous nuclear ribonucleoprotein F. | Serine/arginine-rich splicing factor 1. | 0.702 |
HNRNPF | Srsf4-2 | A0A0V0UBB8 | A0A0V0UAS8 | Heterogeneous nuclear ribonucleoprotein F. | Serine/arginine-rich splicing factor 4. | 0.788 |
HNRNPF | T05_2796 | A0A0V0UBB8 | A0A0V0UD98 | Heterogeneous nuclear ribonucleoprotein F. | Y-box factor-like protein. | 0.661 |
Hnrnpl | B52 | A0A0V0U8T3 | A0A0V0TN22 | Heterogeneous nuclear ribonucleoprotein L. | Serine-arginine protein 55. | 0.634 |
Hnrnpl | HNRNPF | A0A0V0U8T3 | A0A0V0UBB8 | Heterogeneous nuclear ribonucleoprotein L. | Heterogeneous nuclear ribonucleoprotein F. | 0.771 |
Hnrnpl | Myef2 | A0A0V0U8T3 | A0A0V0TY60 | Heterogeneous nuclear ribonucleoprotein L. | Myelin expression factor 2. | 0.676 |
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