STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psmb7Proteasome subunit beta type-7. (279 aa)    
Predicted Functional Partners:
rpn-6.1
Putative 26S proteasome regulatory subunit rpn-6.1.
   
 0.999
PSMA4
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.999
PSMB2
Proteasome subunit beta type-2.
   
 0.999
Psmd3
26S proteasome non-ATPase regulatory subunit 3.
   
 0.999
PSMD13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.999
psmB5
Proteasome subunit beta type-5.
  
0.999
Psmd12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.999
pbs-3
Proteasome subunit beta.
   
 0.999
Psma5
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.999
Psmc2
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.999
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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