STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T05_286Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. (1062 aa)    
Predicted Functional Partners:
PHKG1
Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily.
   
 0.867
T05_15262
Calmodulin; Belongs to the calmodulin family.
    
 0.692
cam1
Calmodulin.
    
 0.692
GlyP
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.669
T05_9475
Calmodulin.
    
 0.666
tnc-2
Troponin C, isoform 2.
    
  0.611
ACADSB
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial.
    
  0.611
cal-1
Calmodulin-like protein.
    
  0.611
EFCAB7
EF-hand calcium-binding domain-containing protein 7.
    
  0.611
cal-1-2
Calmodulin-like protein.
    
  0.611
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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