STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrp2Low-density lipoprotein receptor-related protein 2. (961 aa)    
Predicted Functional Partners:
PPP2R3A
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha.
   
    0.943
Lrp1b
Low-density lipoprotein receptor-related protein 1B.
  
 
0.777
eys
Protein eyes shut.
    
 0.743
Egfr
Receptor protein-tyrosine kinase.
   
 0.702
Itsn1
Intersectin-1.
    
 0.684
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.671
APPL1
DCC-interacting protein 13-alpha.
    
 0.663
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
   
 0.646
WNT-1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
  
 
 0.643
gulp1
PTB domain-containing engulfment adapter protein 1.
    
 0.634
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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