STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPD-2Carboxypeptidase-like protein. (1170 aa)    
Predicted Functional Partners:
Gak
Cyclin-G-associated kinase.
    
  0.983
AP1M1
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
  0.583
Slit3
Slit-like protein 3 protein.
     
 0.550
mrps-16
Putative beta-arrestin.
     
 0.538
Gba2
AP-1 complex subunit gamma-1.
     
 0.535
unc-11
Phosphatidylinositol-binding clathrin assembly protein unc-11.
     
 0.521
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
     
 0.507
snb-1
Synaptobrevin-1.
     
 0.504
Rho1
Ras-like GTP-binding protein Rho1.
     
 0.497
chp
Chaoptin.
    
 0.477
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.