STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLA2G15Group XV phospholipase A2. (652 aa)    
Predicted Functional Partners:
SOAT1
O-acyltransferase.
    
 0.952
LPIN2
Phosphatidate phosphatase LPIN2.
    
 0.921
PLD1
Phospholipase.
     
 0.894
T05_8732
Uncharacterized protein.
     
 0.884
Agpat6
Glycerol-3-phosphate acyltransferase 4.
    
 0.883
PPT1
Palmitoyl-protein thioesterase 1.
     
 0.869
sws
Neuropathy target esterase sws.
     
 0.864
Lpcat1
Lysophosphatidylcholine acyltransferase 1.
    
 0.847
dgat2
Diacylglycerol O-acyltransferase 2.
    
 0.840
dgat2-2
2-acylglycerol O-acyltransferase 2-A.
    
 0.840
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.