STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bzrap1Peripheral-type benzodiazepine receptor-associated protein 1. (1424 aa)    
Predicted Functional Partners:
unc-10
Rab-3-interacting molecule unc-10.
    
 0.999
CASK
Peripheral plasma membrane protein CASK.
     
 0.983
Aplip1
JNK-interacting protein 1.
    
 
 0.927
unc-13
Phorbol ester/diacylglycerol-binding protein unc-13.
   
 0.927
syd-2
Liprin-alpha.
     
 0.845
rab-3
Ras-related protein Rab-3.
     
 0.791
KAZN
Kazrin.
     
 0.749
unc-64
Syntaxin-1A; Belongs to the syntaxin family.
     
 0.710
Snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.646
Syn
Synapsin.
     
 0.642
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.