STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC7-1Putative cell division control protein 7-like protein 1; Belongs to the protein kinase superfamily. (378 aa)    
Predicted Functional Partners:
mcm2
DNA helicase; Belongs to the MCM family.
   
 0.999
MCM4
DNA helicase; Belongs to the MCM family.
   
 0.998
mcm5-a
DNA helicase; Belongs to the MCM family.
   
 0.996
mmcm3
DNA helicase; Belongs to the MCM family.
   
 0.996
zmcm6-b
DNA helicase; Belongs to the MCM family.
   
 0.996
Mcm7
DNA replication licensing factor mcm7; Belongs to the peptidase C19 family.
    
 0.995
ATR
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 0.991
Mcm9
DNA helicase MCM9; Belongs to the MCM family.
   
 0.966
Mcm8
DNA helicase MCM8; Belongs to the MCM family.
   
 0.943
Orc5
Origin recognition complex subunit 5.
   
 0.913
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.