STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chsy1Hexosyltransferase. (767 aa)    
Predicted Functional Partners:
CHPF
Hexosyltransferase.
  
 
0.951
B3gat1
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
    
 0.828
bre-4
Beta-1,4-N-acetylgalactosaminyltransferase bre-4.
     
 0.816
FUT8
Alpha-(1,6)-fucosyltransferase; Belongs to the glycosyltransferase 23 family.
    
  0.803
CSPG4
Chondroitin sulfate proteoglycan 4.
     
 0.559
sqv-3
Putative galactosyltransferase sqv-3.
      
 0.505
UXS1
UDP-glucuronic acid decarboxylase 1.
      
 0.489
EGF1-2
Fibropellin-1.
     
 0.478
T05_13910
C-type lectin domain-containing protein.
     
 0.461
alg11
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase.
      
 0.457
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.