STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTTIP1Deoxynucleotidyltransferase terminal-interacting protein 1. (355 aa)    
Predicted Functional Partners:
SNUPN
Snurportin-1.
     
 0.865
Trerf1
Transcriptional-regulating factor 1.
    
 
 0.758
T05_9155
Uncharacterized protein.
    
 
 0.641
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.555
HDAC1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.530
Hdac1
Histone deacetylase 1.
    
 
 0.530
Rpd3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.530
HDAC1-2
Histone deacetylase 1.
    
 
 0.530
HDAC1-3
Histone deacetylase 1.
    
 
 0.530
NUDC
Nuclear migration protein nudC.
      
 0.439
Your Current Organism:
Trichinella murrelli
NCBI taxonomy Id: 144512
Other names: T. murrelli, Trichinella T5, Trichinella murrelli Pozio & La Rosa 2000, Trichinella sp. T5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.