Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CFIO01_02452 | CFIO01_02797 | A0A010Q1H3 | A0A010Q9Y5 | Uncharacterized protein. | SGNH_hydro domain-containing protein. | 0.413 |
CFIO01_02452 | CFIO01_03139 | A0A010Q1H3 | A0A010R099 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.999 |
CFIO01_02452 | CFIO01_08117 | A0A010Q1H3 | A0A010QK79 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.931 |
CFIO01_02452 | CFIO01_09494 | A0A010Q1H3 | A0A010Q2Q2 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.923 |
CFIO01_02452 | CFIO01_09873 | A0A010Q1H3 | A0A010RAS7 | Uncharacterized protein. | Nuclear pore glycoprotein p62. | 0.952 |
CFIO01_02797 | CFIO01_02452 | A0A010Q9Y5 | A0A010Q1H3 | SGNH_hydro domain-containing protein. | Uncharacterized protein. | 0.413 |
CFIO01_02797 | CFIO01_03139 | A0A010Q9Y5 | A0A010R099 | SGNH_hydro domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.416 |
CFIO01_02797 | CFIO01_08117 | A0A010Q9Y5 | A0A010QK79 | SGNH_hydro domain-containing protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.401 |
CFIO01_02797 | CFIO01_08130 | A0A010Q9Y5 | A0A010RVQ1 | SGNH_hydro domain-containing protein. | 50S ribosomal protein L2. | 0.404 |
CFIO01_02797 | CFIO01_09494 | A0A010Q9Y5 | A0A010Q2Q2 | SGNH_hydro domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.409 |
CFIO01_02797 | CFIO01_09873 | A0A010Q9Y5 | A0A010RAS7 | SGNH_hydro domain-containing protein. | Nuclear pore glycoprotein p62. | 0.415 |
CFIO01_03139 | CFIO01_02452 | A0A010R099 | A0A010Q1H3 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.999 |
CFIO01_03139 | CFIO01_02797 | A0A010R099 | A0A010Q9Y5 | Nuclear cap-binding protein subunit 2. | SGNH_hydro domain-containing protein. | 0.416 |
CFIO01_03139 | CFIO01_08117 | A0A010R099 | A0A010QK79 | Nuclear cap-binding protein subunit 2. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.954 |
CFIO01_03139 | CFIO01_09494 | A0A010R099 | A0A010Q2Q2 | Nuclear cap-binding protein subunit 2. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.982 |
CFIO01_03139 | CFIO01_09873 | A0A010R099 | A0A010RAS7 | Nuclear cap-binding protein subunit 2. | Nuclear pore glycoprotein p62. | 0.948 |
CFIO01_08117 | CFIO01_02452 | A0A010QK79 | A0A010Q1H3 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.931 |
CFIO01_08117 | CFIO01_02797 | A0A010QK79 | A0A010Q9Y5 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | SGNH_hydro domain-containing protein. | 0.401 |
CFIO01_08117 | CFIO01_03139 | A0A010QK79 | A0A010R099 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Nuclear cap-binding protein subunit 2. | 0.954 |
CFIO01_08130 | CFIO01_02797 | A0A010RVQ1 | A0A010Q9Y5 | 50S ribosomal protein L2. | SGNH_hydro domain-containing protein. | 0.404 |
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