STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFIO01_07761SUR7 protein. (307 aa)    
Predicted Functional Partners:
CFIO01_03168
Guanylate kinase.
   
 0.853
CFIO01_08123
WD domain-containing protein.
    
 0.851
CFIO01_01374
Uncharacterized protein.
   
 0.841
CFIO01_06327
Tho complex subunit 7.
   
 0.837
CFIO01_11474
ATP-dependent RNA helicase SUB2.
   
 0.829
CFIO01_09112
Myb-like DNA-binding domain-containing protein.
   
 
 0.743
CFIO01_01983
Helicase associated domain-containing protein.
   
 0.738
CFIO01_03139
Nuclear cap-binding protein subunit 2.
    
 0.692
CFIO01_02452
Uncharacterized protein.
    
 0.689
CFIO01_03026
RNA binding protein.
   
 0.681
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.