STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFIO01_00314Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
CFIO01_02447
3'-5' exonuclease.
  
 
 0.617
CFIO01_09484
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 
 0.512
CFIO01_10707
Origin recognition complex subunit Orc5.
    
 
 0.490
CFIO01_07071
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
 
 0.483
CFIO01_06998
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 
 0.459
CFIO01_05158
DNA replication factor Dna2.
    
 
 0.453
CFIO01_03812
Infection structure specific protein.
  
     0.420
CFIO01_00563
UvrD/REP helicase.
  
 
 0.417
CFIO01_08597
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.405
CFIO01_08598
Vezatin domain-containing protein.
  
 
 0.405
Your Current Organism:
Colletotrichum fioriniae
NCBI taxonomy Id: 1445577
Other names: C. fioriniae PJ7, Colletotrichum fioriniae PJ7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.