STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE84496.1Hypothetical protein. (398 aa)    
Predicted Functional Partners:
GAE84498.1
Hypothetical protein.
 
     0.859
GAE84499.1
Rhamnogalacturonides degradation protein RhiN.
      0.857
GAE84500.1
Rhamnogalacturonides degradation protein RhiN.
     0.828
GAE84497.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.790
GAE84495.1
Beta-glucanase.
 
     0.644
GAE84637.1
Arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.542
GAE83718.1
Chondroitinase AC precursor.
  
     0.504
GAE83775.1
Beta-galactosidase.
  
     0.503
GAE83714.1
Glucuronyl hydrolase.
 
     0.467
GAE84828.1
Polygalacturonase.
  
     0.466
Your Current Organism:
Bacteroides reticulotermitis
NCBI taxonomy Id: 1445607
Other names: B. reticulotermitis JCM 10512, Bacteroides reticulotermitis JCM 10512, Bacteroides sp. JCM 10512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.