STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE85608.1Purple acid phosphatase. (209 aa)    
Predicted Functional Partners:
GAE85610.1
Purple acid phosphatase.
     0.973
GAE85609.1
Purple acid phosphatase.
 
     0.944
GAE85172.1
Two-component system sensor histidine kinase.
  
 
 0.863
GAE85903.1
Two-component system sensor histidine kinase.
  
 
 0.683
GAE84973.1
Two-component system sensor histidine kinase.
   
 
 0.625
GAE85572.1
Two-component system sensor histidine kinase.
   
 
 0.625
GAE82222.1
Protein containing hemopexin repeats.
  
 
  0.623
GAE85607.1
Sodium-dependent transporter.
       0.567
GAE85173.1
Two-component system sensor histidine kinase.
     
 0.527
GAE86522.1
Two-component system sensor histidine kinase.
     
 0.505
Your Current Organism:
Bacteroides reticulotermitis
NCBI taxonomy Id: 1445607
Other names: B. reticulotermitis JCM 10512, Bacteroides reticulotermitis JCM 10512, Bacteroides sp. JCM 10512
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